Ac on Chromosome 2

 

Chromosome 2 of maize showing the position of mapped Ac elements

Current Status (last updated 05/06/04). 3 mapped.

A number of seed stocks are currently available through the Maize Genetics CoOp. Contact Tom Brutnell (tpb8@cornell.edu) for further details.

Search the chromosome 2 Ac collection in any of the following ways:

1) Scroll down to browse Ac elelments on chromosome 2. Ac listed by map position north to south.
2) Click on bin numbers listed below the map to jump to the first Ac in that bin.
3) Use the jump menus below the map to go direct to data on a named Ac.

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Ac-bti00191

Typical kernel variegation patterns observed in seed homozygous for Ac-bti00191, and the Ds reporter (Ac-bti00191/Ac-bti00191, r-sc:m3/r-sc:m3)

The flanking sequence of Ac-bti00191 was initially cloned from a ~6.1 kb band, isolated from a genomic digestion using Pst1 and hybridized with a probe designed from an internal EcoR1-HindIII fragment of Ac.

Insertion of the Ac element into the cloned sequence was confirmed through PCR verification, as well as through Southern blot verification. We highly recommend confirming the position of all Ac lines using both PCR and Southern blot verification prior to large scale mutagenesis (see Brutnell and Conrad, 2003, Methods in Molecular Biology, 236:157-76.

Map position : 2.02 (IBM population)
Map coordinate at MaizeGDB

Seed in stock. Genbank Accession #: AY559204

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Ac-bti00225

The flanking sequence of Ac-bti00225 was initially cloned from a ~3.7 kb band, isolated from a genomic digestion using EcoR1 and hybridized with a probe designed from the internal 700 bp EcoR1-HindIII fragment of Ac.

Insertion of the Ac element into the cloned sequence was confirmed through PCR verification. We highly recommend confirming the position of all Ac lines using both PCR and Southern blot verification prior to large scale mutagenesis (see Brutnell and Conrad, 2003, Methods in Molecular Biology, 236:157-76.

Map position : 2.02 (mapping data currently unavailable)
Map coordinate at MaizeGDB

Seed in stock. Genbank Accession #: AY559205

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Ac-bti03811

The flanking sequence of Ac-bti03811 was initially cloned from a ~4.0 kb band, isolated from a genomic digestion using EcoR1 and hybridized with a probe designed from the internal 900 bp EcoR1-HindIII fragment of Ac.

Insertion of the Ac element into the cloned sequence was confirmed through PCR verification. We highly recommend confirming the position of all Ac lines using both PCR and Southern blot verification prior to large scale mutagenesis (see Brutnell and Conrad, 2003, Methods in Molecular Biology, 236:157-76.

Map position : 2.04/2.05 (IBM population)
Map coordinate at MaizeGDB

Seed in stock. Genbank Accession #: NA

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Ac-mon00084

The flanking sequence of Ac-mon00084 was initially cloned from a ~6.1 kb band, isolated from a genomic digestion using EcoR1 and hybridized with a probe designed from the internal 700 bp EcoR1-HindIII fragment of Ac.

Insertion of the Ac element into the cloned sequence was confirmed through PCR verification, as well as through Southern blot verification. We highly recommend confirming the position of all Ac lines using both PCR and Southern blot verification prior to large scale mutagenesis (see Brutnell and Conrad, 2003, Methods in Molecular Biology, 236:157-76.

Map position : 2.08 (IBM population)
Map coordinate at MaizeGDB

Seed in stock. Genbank Accession #: AY618474

 

 

 

 

 

 

 

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