Ac-mon00200 Southern blot verification

Ac-mon00200 Southern blot verification:
Lane 1 = Ac-mon00200.5
Lane 2 = Ac-mon00200.4
Lane 3 = W22
Lane 4 = Ac-bti97156
Lane D = DIG VII ladder

Restriction Enzyme: EcoR1
Expected band size:. ~9.5 kb

Southern verification notes: Genomic DNA isolated from lines carrying Ac-mon00200 (lanes 1 & 2) or the progenitor lines (lanes 3 & 4), was digested with EcoR1, fractionated on agarose gels and transferred to nylon membranes. A DIG-labeled flanking sequence probe of 289 bp was generated using the Ac-end primer and flanking sequence primer (see PCR verification). Because EcoR1 cuts within the Ac element, the EcoR1 fragment shifts in the lines containing Ac-mon00200 relative to the progenitor lines. Detailed descriptions of the Southern blot verification can be found in Brutnell and Conrad, 2003, Methods in Molecular Biology 236:157-76.


back to Ac-mon00200